Hi,
I have an app deployed using requirement.txt and it is working fine. Now, I want an additional feature in my app, which requires me to use a package only available in Anaconda. After switching to environment.yml, I am experiencing problems in deploying the app although it works fine locally.
I replicated the issue with a simple app (github link) just importing streamlit from conda-forge channel. I am getting “installer returned a non-zero exit code” error.
I am getting a different error if I include pip and some other packages (streamlit and pytorch) to be installed by pip in the environment.yml. This time it dowloads and installs the required packages. Although streamlit can be imported in the main app file, pytorch can’t be imported and the app returns “ModuleNotFoundError”. Following is the entire log:
[ UTC ] Logs for mb3636-test-streamlit-conda-streamlit-app-xjir25.streamlit.app/
────────────────────────────────────────────────────────────────────────────────────────
[11:41:14] 🖥 Provisioning machine...
[11:41:19] 🎛 Preparing system...
[11:41:25] ⛓ Spinning up manager process...
[11:41:32] 🎈 Inflating balloons...
[11:41:29] 🚀 Starting up repository: 'test-streamlit-conda', branch: 'master', main module: 'streamlit_app.py'
[11:41:29] 🐙 Cloning repository...
[11:41:30] 🐙 Cloning into '/app/test-streamlit-conda'...
[11:41:30] 🐙 Cloned repository!
[11:41:30] 🐙 Pulling code changes from Github...
[11:41:31] 📦 Processing dependencies...
Collecting package metadata (repodata.json): ...working... [2022-11-14 11:42:41.078038] done
Solving environment: ...working... [2022-11-14 11:42:45.776758] done
Downloading and Extracting Packages
wheel-0.38.4 | 32 KB | | 0% [2022-11-14 11:42:45.962482]
wheel-0.38.4 | 32 KB | ########## | 100% [2022-11-14 11:42:45.962741]
wheel-0.38.4 | 32 KB | ########## | 100% [2022-11-14 11:42:45.963021]
openssl-1.1.1o | 2.1 MB | | 0% [2022-11-14 11:42:46.063620]
openssl-1.1.1o | 2.1 MB | ######6 | 66% [2022-11-14 11:42:46.319026]
openssl-1.1.1o | 2.1 MB | ########## | 100% [2022-11-14 11:42:46.319331]
ca-certificates-2022 | 150 KB | | 0% [2022-11-14 11:42:46.363861]
ca-certificates-2022 | 150 KB | ########## | 100% [2022-11-14 11:42:46.364187]
certifi-2022.9.24 | 155 KB | | 0% [2022-11-14 11:42:46.418541]
certifi-2022.9.24 | 155 KB | ########## | 100% [2022-11-14 11:42:46.418843]
Verifying transaction: ...working... [2022-11-14 11:42:46.848406] done
Installing pip dependencies: ...working... [2022-11-14 11:43:46.893634] Ran pip subprocess with arguments:
['/home/appuser/.conda/bin/python', '-m', 'pip', 'install', '-U', '-r', '/app/test-streamlit-conda/condaenv.j0bcqmpz.requirements.txt']
Pip subprocess output:
Collecting streamlit
Downloading streamlit-1.14.1-py2.py3-none-any.whl (9.2 MB)
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Collecting rich>=10.11.0
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Collecting cachetools>=4.0
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Collecting tornado>=5.0
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Collecting packaging>=14.1
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Downloading typing_extensions-4.4.0-py3-none-any.whl (26 kB)
Collecting validators>=0.2
Downloading validators-0.20.0.tar.gz (30 kB)
Preparing metadata (setup.py): started
Preparing metadata (setup.py): finished with status 'done'
Collecting importlib-metadata>=1.4
Downloading importlib_metadata-5.0.0-py3-none-any.whl (21 kB)
Collecting toml
Downloading toml-0.10.2-py2.py3-none-any.whl (16 kB)
Collecting numpy
Downloading numpy-1.23.4-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (17.1 MB)
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Collecting pydeck>=0.1.dev5
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Collecting watchdog
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Collecting click>=7.0
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Collecting nvidia-cuda-nvrtc-cu11==11.7.99
Downloading nvidia_cuda_nvrtc_cu11-11.7.99-2-py3-none-manylinux1_x86_64.whl (21.0 MB)
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Collecting nvidia-cublas-cu11==11.10.3.66
Downloading nvidia_cublas_cu11-11.10.3.66-py3-none-manylinux1_x86_64.whl (317.1 MB)
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Collecting nvidia-cuda-runtime-cu11==11.7.99
Downloading nvidia_cuda_runtime_cu11-11.7.99-py3-none-manylinux1_x86_64.whl (849[2022-11-14 11:43:46.902055] kB)
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Collecting zipp>=0.5
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Building wheels for collected packages: validators
Building wheel for validators (setup.py): started
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Created wheel for validators: filename=validators-0.20.0-py3-none-any.whl size=19581 sha256=558a631564197bc5f5f49f343871187041cc1a17505031ec7ff7ffbecccfde49
Stored in directory: /tmp/pip-ephem-wheel-cache-s97ro0je/wheels/5c/6a/fd/17a2b6f8d376e336d46414eeaf656327fd973158159b059046
Successfully built validators
Installing collected packages: pytz, commonmark, zipp, wheel, watchdog, urllib3, tzdata, typing-extensions, tornado, toolz, toml, smmap, six, setuptools, semver, pyrsistent, pyparsing, pympler, pygments, protobuf, pillow, nvidia-cuda-nvrtc-cu11, numpy, MarkupSafe, idna, entrypoints, decorator, click, charset-normalizer, certifi, cachetools, blinker, attrs, validators, rich, requests, pytz-deprecation-shim, python-dateutil, pyarrow, packaging, nvidia-cuda-runtime-cu11, nvidia-cublas-cu11, jsonschema, jinja2, importlib-metadata, gitdb, tzlocal, pydeck, pandas, nvidia-cudnn-cu11, gitpython, torch, altair, streamlit
Attempting uninstall: wheel
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Successfully installed MarkupSafe-2.1.1 altair-4.2.0 attrs-22.1.0 blinker-1.5 cachetools-5.2.0 certifi-2022.9.24 charset-normalizer-2.1.1 click-8.1.3 commonmark-0.9.1 decorator-5.1.1 entrypoints-0.4 gitdb-4.0.9 gitpython-3.1.29 idna-3.4 importlib-metadata-5.0.0 jinja2-3.1.2 jsonschema-4.17.0 numpy-1.23.4 nvidia-cublas-cu11-11.10.3.66 nvidia-cuda-nvrtc-cu11-11.7.99 nvidia-cuda-runtime-cu11-11.7.99 nvidia-cudnn-cu11-8.5.0.96 packaging-21.3 pandas-1.5.1 pillow-9.3.0 protobuf-3.20.3 pyarrow-10.0.0 pydeck-0.8.0 pygments-2.13.0 pympler-1.0.1 pyparsing-3.0.9 pyrsistent-0.19.2 python-dateutil-2.8.2 pytz-2022.6 pytz-deprecation-shim-0.1.0.post0 requests-2.28.1 rich-12.6.0 semver-2.13.0 setuptools-65.5.1 six-1.16.0 smmap-5.0.0 streamlit-1.14.1 toml-0.10.2 toolz-0.12.0 torch-1.13.0 tornado-6.2 typing-extensions-4.4.0 tzdata-2022.6 tzlocal-4.2 urllib3-1.26.12 validators-0.20.0 watchdog-2.1.9 wheel-0.38.4 zipp-3.10.0
done
#
# To activate this environment, use
#
# $ conda activate base
#
# To deactivate an active environment, use
#
# $ conda deactivate
Retrieving notices: ...working... [2022-11-14 11:43:47.039103] done
[11:44:18] 🐍 Python dependencies were installed from /app/test-streamlit-conda/environment.yml using conda.
Check if streamlit is installed
──────────────────────────────── Installing Streamlit ──────────────────────────────────
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Building wheels for collected packages: validators
Building wheel for validators (setup.py): started
Building wheel for validators (setup.py): finished with status 'done'
Created wheel for validators: filename=validators-0.20.0-py3-none-any.whl size=19579 sha256=92eced29e1281cadf7a6c5d7ded5095a924443c2ea18c4277d11ad8dd144994f
Stored in directory: /tmp/pip-ephem-wheel-cache-_95qo1zo/wheels/f2/ed/dd/d3a556ad245ef9dc570c6bcd2f22886d17b0b408dd3bbb9ac3
Successfully built validators
Installing collected packages: pytz, commonmark, zipp, watchdog, urllib3, tzdata, typing-extensions, tornado, toolz, toml, smmap, six, semver, pyrsistent, pyparsing, pympler, pygments, protobuf, pillow, numpy, MarkupSafe, idna, entrypoints, decorator, click, charset-normalizer, certifi, cachetools, blinker, attrs, validators, rich, requests, pytz-deprecation-shim, python-dateutil, pyarrow, packaging, jsonschema, jinja2, importlib-metadata, gitdb, tzlocal, pydeck, pandas, gitpython, altair, streamlit
Successfully installed MarkupSafe-2.1.1 altair-4.2.0 attrs-22.1.0 blinker-1.5 cachetools-5.2.0 certifi-2022.9.24 charset-normalizer-2.1.1 click-8.1.3 commonmark-0.9.1 decorator-5.1.1 entrypoints-0.4 gitdb-4.0.9 gitpython-3.1.29 idna-3.4 importlib-metadata-5.0.0 jinja2-3.1.2 jsonschema-4.17.0 numpy-1.23.4 packaging-21.3 pandas-1.5.1 pillow-9.3.0 protobuf-3.20.3 pyarrow-10.0.0 pydeck-0.8.0 pygments-2.13.0 pympler-1.0.1 pyparsing-3.0.9 pyrsistent-0.19.2 python-dateutil-2.8.2 pytz-2022.6 pytz-deprecation-shim-0.1.0.post0 requests-2.28.1 rich-12.6.0 semver-2.13.0 six-1.16.0 smmap-5.0.0 streamlit-1.14.1 toml-0.10.2 toolz-0.12.0 tornado-6.2 typing-extensions-4.4.0 tzdata-2022.6 tzlocal-4.2 urllib3-1.26.12 validators-0.20.0 watchdog-2.1.9 zipp-3.10.0
WARNING: You are using pip version 22.0.3; however, version 22.3.1 is available.
You should consider upgrading via the '/home/appuser/venv/bin/python -m pip install --upgrade pip' command.
────────────────────────────────────────────────────────────────────────────────────────
[11:44:36] 📦 Processed dependencies!
Collecting usage statistics. To deactivate, set browser.gatherUsageStats to False.
2022-11-14 11:44:57.408 Uncaught app exception
Traceback (most recent call last):
File "/home/appuser/venv/lib/python3.10/site-packages/streamlit/runtime/scriptrunner/script_runner.py", line 563, in _run_script
exec(code, module.__dict__)
File "/app/test-streamlit-conda/streamlit_app.py", line 2, in <module>
import torch
ModuleNotFoundError: No module named 'torch'
