Hello everyone! I would like to share the tool I created using Streamlit for the following paper https://www.sciencedirect.com/science/article/pii/S2001037022000526?via%3Dihub.
I am looking forward to hearing your opinions and suggestions!
Source code and documentation can be found here https://github.com/AAnzel/MOVIS.
@aanzel interesting app! I don’t have much background in genomics, can you clarify how gensim is used in your framework? I use it to classify document.
@wgong27514 thank you very much!
Sure! Since MOVIS works with time-series data, each FASTA file represents a single time point. A FASTA file contains multiple D(R)NA sequences (words created using alphabet {A, C, G, T}). Each FASTA file can be considered a sentence (or a whole document). Gensim is used to embed these “sentences” into numerical vectors. More info can be found here https://github.com/AAnzel/MOVIS/wiki/2.-Methods. 
@aanzel Thank you for the explanation and the wiki link, going to read it.